BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006B11LP1|AL425487
(1034 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1576 1473 0.0
>3x_Contig1576
Length = 13648
Score = 1473 bits (739), Expect = 0.0
Identities = 747/749 (99%), Gaps = 1/749 (0%)
Strand = Plus / Minus
Query: 287 ttatttaacgtttgtataccatttatattagtagaatattttcgcagatcccgtcattcg 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2508 ttatttaacgtttgtataccatttatattagtagaatattttcgcagatcccgtcattcg 2449
Query: 347 atatccaaacaacacaatgtcaggtcctatcattggtattgcatttggtaacacttcctc 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2448 atatccaaacaacacaatgtcaggtcctatcattggtattgcatttggtaacacttcctc 2389
Query: 407 atctattgcctacgtcaatccaaagaacgatgtcgatgtcatcgctaacccagatggtga 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2388 atctattgcctacgtcaatccaaagaacgatgtcgatgtcatcgctaacccagatggtga 2329
Query: 467 acgttccatcccatctgtgctatcttacgttggcgaagacgaataccatggtggtcaagc 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2328 acgttccatcccatctgtgctatcttacgttggcgaagacgaataccatggtggtcaagc 2269
Query: 527 tttgcaacaattggtgagaaatccaaagaacactattattaacttccgtgactttattgg 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2268 tttgcaacaattggtgagaaatccaaagaacactattattaacttccgtgactttattgg 2209
Query: 587 tttaccattctccgaatgtgatgcttccagatgtgcaac-ggtgctccagtcatcgaaat 645
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2208 tttaccattctccgaatgtgatgcttccagatgtgcaaccggtgctccagtcatcgaaat 2149
Query: 646 cgatggaaaggctggttttgttgtcaacagaggcgatggtgttgaggaaaaacttaccgt 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2148 cgatggaaaggctggttttgttgtcaacagaggcgatggtgttgaggaaaaacttaccgt 2089
Query: 706 tgatgaagttgtctccagacacttgaagaatttgaagttagccgcagaagattacattgg 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2088 tgatgaagttgtctccagacacttgaagaatttgaagttagccgcagaagattacattgg 2029
Query: 766 tcaaaccatttctaaagctgttttgactgtcccaaccaacttcactgatgtccagaagga 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2028 tcaaaccatttctaaagctgttttgactgtcccaaccaacttcactgatgtccagaagga 1969
Query: 826 cgctttgaagaaggctgctgcaaatgttgaattggaaattgtttacttcatcaatgaacc 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1968 cgctttgaagaaggctgctgcaaatgttgaattggaaattgtttacttcatcaatgaacc 1909
Query: 886 atcctctgctctattggctcatgttgaagaattccccttggacagagaccaaaacgtcgt 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1908 atcctctgctctattggctcatgttgaagaattccccttggacagagaccaaaacgtcgt 1849
Query: 946 cgttgctgatttcggtggtgttagatctgatgccgctgttattgctatccgtaatggtat 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1848 cgttgctgatttcggtggtgttagatctgatgccgctgttattgctatccgtaatggtat 1789
Query: 1006 cttcactttgttggctactgracatgatt 1034
|||||||||||||||||||| ||||||||
Sbjct: 1788 cttcactttgttggctactgaacatgatt 1760
Score = 494 bits (248), Expect = e-139
Identities = 259/262 (98%), Gaps = 1/262 (0%)
Strand = Plus / Minus
Query: 1 gagaattttattgcattactgttaatgtcattgggatatagtctcagaagtagtctaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2794 gagaattttattgcattactgttaatgtcattgggatatagtctcagaagtagtctaaga 2735
Query: 61 agtgctttagctgtatcacaagaattgcgttaagcaaacgtcaataaccagtgcaa-ata 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2734 agtgctttagctgtatcacaagaattgcgttaagcaaacgtcaataaccagtgcaacata 2675
Query: 120 gaccaatgktcacgtgtaacatctttatatcacttacccttccttggtatttcgattttg 179
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2674 gaccaacggtcacgtgtaacatctttatatcacttacccttccttggtatttcgattttg 2615
Query: 180 caaaaattttcaaaggctcgtttcgagcagtaaattagacgattcaatactgtagatgcg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2614 caaaaattttcaaaggctcgtttcgagcagtaaattagacgattcaatactgtagatgcg 2555
Query: 240 atgcgatgagctgacttaattt 261
||||||||||||||||||||||
Sbjct: 2554 atgcgatgagctgacttaattt 2533
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,362
Number of Sequences: 1807
Number of extensions: 12362
Number of successful extensions: 982
Number of sequences better than 1.0e-20: 1
length of query: 1034
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1018
effective length of database: 10,329,639
effective search space: 10515572502
effective search space used: 10515572502
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)